Note
Finished admendments for compendium stage.
Untimed: Research compendium
Tried testthat in docker following yesterday’s fix, and found that it manages to find scenario if the function is copied and pasted into test-model.R but not when it is sourced (source("../../scripts/covid_triage_simr.R")). I tried an alternative approach of having an optional scen parameter, which fixed it. Double-checked main.R with one of the runs of the loop, which worked fine.
With that fixed, I did the final steps of:
- Setting up the GHCR action
- Completing the reproduction README
This is now ready for (a) consensus from Tom, so can then email the author, and (b) test-run, so can then archive.